SPARCED
About
Instructions & Beginners
Replicate our results
Dependencies
Further information
Acknowledgments
The SPARCED Installation Guide for Absolute Beginners
Environment
Command Line Interface Installation
OpenMPI on Windows
Git, GitHub & SSH
Anaconda
SPARCED 🎆
Clean
Tutorials
Jupyter Notebook
SPARCED Hands-On Primer Tutorial
Using the SPARCED Command Line Interface (CLI)
Building and Running the SPARCED Singularity Container
SPARCED input file format specification
Species Naming Conventions
Replicate Published Papers
Bouhaddou 2018 model
Erdem 2022 model
Mutsuddy 2023 model
Reference Documentation
Models
Input files
Source code
Future developments
License
SPARCED
Jupyter Notebook
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How to run SPARCED in a Jupyter Notebook and what we provide